Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.55□□□□□ -0.56
Smim1P0C8K7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Smim1P0C8K7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.54□□□□□ -0.56
Smim1P0C8K7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.54□□□□□ -0.56
Smim1P0C8K7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smim1P0C8K7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.53□□□□□ -0.56
Smim1P0C8K7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Gm43060-201ENSMUST00000200621 289 ntBASIC11.53□□□□□ -0.56
Smim1P0C8K7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smim1P0C8K7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Smim1P0C8K7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.52□□□□□ -0.57
Smim1P0C8K7 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.52□□□□□ -0.57
Smim1P0C8K7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smim1P0C8K7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms