Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxa6P09092 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa6P09092 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa6P09092 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.33□□□□□ -0.11
Hoxa6P09092 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa6P09092 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxa6P09092 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa6P09092 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Gm28033-201ENSMUST00000184224 96 ntBASIC14.33□□□□□ -0.12
Hoxa6P09092 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.33□□□□□ -0.12
Hoxa6P09092 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa6P09092 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa6P09092 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxa6P09092 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxa6P09092 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Hoxa6P09092 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxa6P09092 Gm29707-201ENSMUST00000196325 491 ntBASIC14.32□□□□□ -0.12
Hoxa6P09092 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa6P09092 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa6P09092 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxa6P09092 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.31□□□□□ -0.12
Hoxa6P09092 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Gm27741-201ENSMUST00000185060 237 ntBASIC14.31□□□□□ -0.12
Hoxa6P09092 Gm44450-201ENSMUST00000199528 114 ntBASIC14.31□□□□□ -0.12
Hoxa6P09092 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hoxa6P09092 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa6P09092 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Hoxa6P09092 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.31□□□□□ -0.12
Hoxa6P09092 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa6P09092 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms