Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
NefmP08553 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
NefmP08553 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC24.65■■□□□ 1.54
NefmP08553 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Gm12441-201ENSMUST00000121806 588 ntBASIC24.65■■□□□ 1.54
NefmP08553 Il3ra-202ENSMUST00000223589 738 ntBASIC24.65■■□□□ 1.54
NefmP08553 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC24.65■■□□□ 1.54
NefmP08553 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Gm45203-201ENSMUST00000206384 1831 ntBASIC24.65■■□□□ 1.54
NefmP08553 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NefmP08553 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC24.64■■□□□ 1.54
NefmP08553 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NefmP08553 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
NefmP08553 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.64■■□□□ 1.54
NefmP08553 Gm37856-201ENSMUST00000191634 999 ntBASIC24.64■■□□□ 1.54
NefmP08553 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NefmP08553 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NefmP08553 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
NefmP08553 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NefmP08553 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NefmP08553 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NefmP08553 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NefmP08553 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC24.63■■□□□ 1.53
NefmP08553 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC24.63■■□□□ 1.53
NefmP08553 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NefmP08553 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NefmP08553 AC120002.2-201ENSMUST00000220205 773 ntBASIC24.63■■□□□ 1.53
NefmP08553 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.63■■□□□ 1.53
NefmP08553 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NefmP08553 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NefmP08553 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC24.62■■□□□ 1.53
NefmP08553 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC24.62■■□□□ 1.53
NefmP08553 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC24.62■■□□□ 1.53
NefmP08553 Gm7638-201ENSMUST00000121348 967 ntBASIC24.62■■□□□ 1.53
NefmP08553 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
NefmP08553 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC24.62■■□□□ 1.53
NefmP08553 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NefmP08553 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
NefmP08553 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
NefmP08553 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC24.61■■□□□ 1.53
NefmP08553 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.61■■□□□ 1.53
NefmP08553 Trmt13-210ENSMUST00000198454 880 ntBASIC24.61■■□□□ 1.53
NefmP08553 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.61■■□□□ 1.53
NefmP08553 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NefmP08553 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
NefmP08553 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Gm15378-201ENSMUST00000121894 207 ntBASIC24.6■■□□□ 1.53
NefmP08553 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
NefmP08553 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NefmP08553 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC24.6■■□□□ 1.53
NefmP08553 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms