Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NeflP08551 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 Gm4974-201ENSMUST00000209974 875 ntBASIC21.73■■□□□ 1.07
NeflP08551 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NeflP08551 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NeflP08551 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.73■■□□□ 1.07
NeflP08551 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
NeflP08551 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.72■■□□□ 1.07
NeflP08551 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NeflP08551 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NeflP08551 Gm13158-201ENSMUST00000122007 736 ntBASIC21.72■■□□□ 1.07
NeflP08551 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.72■■□□□ 1.07
NeflP08551 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NeflP08551 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NeflP08551 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NeflP08551 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NeflP08551 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NeflP08551 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NeflP08551 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC21.71■■□□□ 1.07
NeflP08551 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC21.71■■□□□ 1.07
NeflP08551 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NeflP08551 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NeflP08551 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
NeflP08551 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.71■■□□□ 1.07
NeflP08551 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.71■■□□□ 1.07
NeflP08551 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NeflP08551 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
NeflP08551 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NeflP08551 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Gm11249-201ENSMUST00000117071 859 ntBASIC21.7■■□□□ 1.06
NeflP08551 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.7■■□□□ 1.06
NeflP08551 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.7■■□□□ 1.06
NeflP08551 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.7■■□□□ 1.06
NeflP08551 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC21.7■■□□□ 1.06
NeflP08551 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NeflP08551 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.7■■□□□ 1.06
NeflP08551 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
NeflP08551 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NeflP08551 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Gm18025-201ENSMUST00000221733 862 ntBASIC21.69■■□□□ 1.06
NeflP08551 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NeflP08551 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC21.69■■□□□ 1.06
NeflP08551 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NeflP08551 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NeflP08551 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NeflP08551 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NeflP08551 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Gm12382-201ENSMUST00000122005 922 ntBASIC21.68■■□□□ 1.06
NeflP08551 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.68■■□□□ 1.06
NeflP08551 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.68■■□□□ 1.06
NeflP08551 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NeflP08551 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NeflP08551 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms