Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P06344 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
P06344 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
P06344 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
P06344 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.86□□□□□ -0.03
P06344 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.86□□□□□ -0.03
P06344 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Gm37722-201ENSMUST00000193757 208 ntBASIC14.86□□□□□ -0.03
P06344 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
P06344 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P06344 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P06344 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
P06344 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.85□□□□□ -0.03
P06344 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
P06344 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.85□□□□□ -0.03
P06344 Gm21362-201ENSMUST00000194272 928 ntBASIC14.85□□□□□ -0.03
P06344 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
P06344 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
P06344 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Gm7367-201ENSMUST00000057611 492 ntBASIC14.85□□□□□ -0.03
P06344 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P06344 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P06344 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P06344 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.84□□□□□ -0.03
P06344 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
P06344 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.84□□□□□ -0.03
P06344 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
P06344 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Gm13186-201ENSMUST00000118031 316 ntBASIC14.84□□□□□ -0.03
P06344 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.84□□□□□ -0.03
P06344 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.84□□□□□ -0.03
P06344 Gm29518-201ENSMUST00000190858 372 ntBASIC14.84□□□□□ -0.03
P06344 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.84□□□□□ -0.03
P06344 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.84□□□□□ -0.03
P06344 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.84□□□□□ -0.03
P06344 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.84□□□□□ -0.03
P06344 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P06344 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
P06344 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P06344 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
P06344 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
P06344 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
P06344 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
P06344 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms