Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdgfrbP05622 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdgfrbP05622 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PdgfrbP05622 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PdgfrbP05622 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.84■□□□□ 0.29
PdgfrbP05622 Gm13474-201ENSMUST00000122466 815 ntBASIC16.84■□□□□ 0.29
PdgfrbP05622 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PdgfrbP05622 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Phf7-203ENSMUST00000226565 1971 ntBASIC16.84■□□□□ 0.29
PdgfrbP05622 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrbP05622 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PdgfrbP05622 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PdgfrbP05622 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PdgfrbP05622 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.83■□□□□ 0.28
PdgfrbP05622 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Gm45058-201ENSMUST00000205810 766 ntBASIC16.83■□□□□ 0.28
PdgfrbP05622 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
PdgfrbP05622 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrbP05622 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PdgfrbP05622 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PdgfrbP05622 Gm6433-201ENSMUST00000118634 875 ntBASIC16.82■□□□□ 0.28
PdgfrbP05622 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrbP05622 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PdgfrbP05622 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PdgfrbP05622 Actl10-202ENSMUST00000226583 1501 ntBASIC16.81■□□□□ 0.28
PdgfrbP05622 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.81■□□□□ 0.28
PdgfrbP05622 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.81■□□□□ 0.28
PdgfrbP05622 Gm13186-201ENSMUST00000118031 316 ntBASIC16.81■□□□□ 0.28
PdgfrbP05622 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.81■□□□□ 0.28
PdgfrbP05622 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PdgfrbP05622 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.81■□□□□ 0.28
PdgfrbP05622 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.81■□□□□ 0.28
PdgfrbP05622 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrbP05622 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.8■□□□□ 0.28
PdgfrbP05622 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PdgfrbP05622 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.8■□□□□ 0.28
PdgfrbP05622 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrbP05622 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms