Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Chrna1P04756 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna1P04756 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna1P04756 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.88■□□□□ 0.45
Chrna1P04756 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chrna1P04756 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Gm15372-201ENSMUST00000120729 834 ntBASIC17.87■□□□□ 0.45
Chrna1P04756 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.87■□□□□ 0.45
Chrna1P04756 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.87■□□□□ 0.45
Chrna1P04756 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Chrna1P04756 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Chrna1P04756 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Chrna1P04756 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.87■□□□□ 0.45
Chrna1P04756 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.87■□□□□ 0.45
Chrna1P04756 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.87■□□□□ 0.45
Chrna1P04756 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chrna1P04756 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna1P04756 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna1P04756 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chrna1P04756 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Chrna1P04756 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.86■□□□□ 0.45
Chrna1P04756 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna1P04756 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chrna1P04756 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.86■□□□□ 0.45
Chrna1P04756 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chrna1P04756 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Chrna1P04756 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Chrna1P04756 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.85■□□□□ 0.45
Chrna1P04756 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chrna1P04756 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chrna1P04756 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.85■□□□□ 0.45
Chrna1P04756 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chrna1P04756 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chrna1P04756 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chrna1P04756 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chrna1P04756 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.84■□□□□ 0.45
Chrna1P04756 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.84■□□□□ 0.45
Chrna1P04756 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.84■□□□□ 0.45
Chrna1P04756 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chrna1P04756 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.83■□□□□ 0.45
Chrna1P04756 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Chrna1P04756 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms