Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Hbb-b1P02088 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.83□□□□□ -0.52
Hbb-b1P02088 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hbb-b1P02088 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Gm10418-201ENSMUST00000100943 576 ntBASIC11.82□□□□□ -0.52
Hbb-b1P02088 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hbb-b1P02088 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.81□□□□□ -0.52
Hbb-b1P02088 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.8□□□□□ -0.52
Hbb-b1P02088 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hbb-b1P02088 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms