Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TcraP01849 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
TcraP01849 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.23□□□□□ -0.45
TcraP01849 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TcraP01849 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
TcraP01849 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TcraP01849 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TcraP01849 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
TcraP01849 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.22□□□□□ -0.45
TcraP01849 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
TcraP01849 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.22□□□□□ -0.45
TcraP01849 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TcraP01849 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TcraP01849 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.21□□□□□ -0.45
TcraP01849 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
TcraP01849 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.21□□□□□ -0.45
TcraP01849 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TcraP01849 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.21□□□□□ -0.45
TcraP01849 Gm7514-201ENSMUST00000209475 934 ntBASIC12.21□□□□□ -0.45
TcraP01849 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TcraP01849 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.21□□□□□ -0.45
TcraP01849 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.21□□□□□ -0.46
TcraP01849 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TcraP01849 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.2□□□□□ -0.46
TcraP01849 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TcraP01849 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms