Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC125437.2-201ENST00000625180 2167 ntBASIC23.29■■□□□ 1.32
MBD4O95243 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.29■■□□□ 1.32
MBD4O95243 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MBD4O95243 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MBD4O95243 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MBD4O95243 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
MBD4O95243 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MBD4O95243 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.28■■□□□ 1.32
MBD4O95243 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
MBD4O95243 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
MBD4O95243 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MBD4O95243 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MBD4O95243 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
MBD4O95243 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MBD4O95243 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
MBD4O95243 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.28■■□□□ 1.32
MBD4O95243 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MBD4O95243 RBM17P1-201ENST00000453646 1190 ntBASIC23.28■■□□□ 1.32
MBD4O95243 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MBD4O95243 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.28■■□□□ 1.32
MBD4O95243 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.28■■□□□ 1.32
MBD4O95243 AC026271.3-201ENST00000571884 352 ntBASIC23.28■■□□□ 1.32
MBD4O95243 AC131212.4-201ENST00000623606 975 ntBASIC23.28■■□□□ 1.32
MBD4O95243 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MBD4O95243 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
MBD4O95243 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
MBD4O95243 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.27■■□□□ 1.32
MBD4O95243 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 AC011506.1-201ENST00000474329 610 ntBASIC23.27■■□□□ 1.32
MBD4O95243 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.27■■□□□ 1.32
MBD4O95243 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.27■■□□□ 1.32
MBD4O95243 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.27■■□□□ 1.32
MBD4O95243 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.27■■□□□ 1.32
MBD4O95243 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
MBD4O95243 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.27■■□□□ 1.32
MBD4O95243 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.27■■□□□ 1.32
MBD4O95243 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MBD4O95243 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.27■■□□□ 1.32
MBD4O95243 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
MBD4O95243 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.26■■□□□ 1.31
MBD4O95243 B3GAT3P1-201ENST00000471720 806 ntBASIC23.26■■□□□ 1.31
MBD4O95243 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.26■■□□□ 1.31
MBD4O95243 MIR6786-201ENST00000616843 113 ntBASIC23.26■■□□□ 1.31
MBD4O95243 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
MBD4O95243 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.26■■□□□ 1.31
MBD4O95243 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
MBD4O95243 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.26■■□□□ 1.31
MBD4O95243 AC079598.2-202ENST00000546624 1451 ntBASIC23.25■■□□□ 1.31
MBD4O95243 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
MBD4O95243 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MBD4O95243 Z85996.1-201ENST00000494644 937 ntBASIC23.25■■□□□ 1.31
MBD4O95243 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.25■■□□□ 1.31
MBD4O95243 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.25■■□□□ 1.31
MBD4O95243 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.25■■□□□ 1.31
MBD4O95243 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MBD4O95243 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.25■■□□□ 1.31
MBD4O95243 AP000525.1-201ENST00000608286 694 ntBASIC23.25■■□□□ 1.31
MBD4O95243 AC073912.3-201ENST00000624414 853 ntBASIC23.25■■□□□ 1.31
MBD4O95243 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.25■■□□□ 1.31
MBD4O95243 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.25■■□□□ 1.31
MBD4O95243 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.25■■□□□ 1.31
MBD4O95243 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
MBD4O95243 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 RCC2P6-201ENST00000526625 1557 ntBASIC23.24■■□□□ 1.31
MBD4O95243 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.24■■□□□ 1.31
MBD4O95243 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.24■■□□□ 1.31
MBD4O95243 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.24■■□□□ 1.31
MBD4O95243 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.24■■□□□ 1.31
MBD4O95243 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.24■■□□□ 1.31
MBD4O95243 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.24■■□□□ 1.31
MBD4O95243 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MBD4O95243 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MBD4O95243 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MBD4O95243 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MBD4O95243 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms