Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.25■□□□□ 0.35
CopeO89079 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Gm10602-201ENSMUST00000098239 609 ntBASIC17.25■□□□□ 0.35
CopeO89079 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.25■□□□□ 0.35
CopeO89079 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CopeO89079 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.25■□□□□ 0.35
CopeO89079 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CopeO89079 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CopeO89079 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.24■□□□□ 0.35
CopeO89079 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CopeO89079 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.24■□□□□ 0.35
CopeO89079 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Gm27275-201ENSMUST00000184318 272 ntBASIC17.24■□□□□ 0.35
CopeO89079 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.24■□□□□ 0.35
CopeO89079 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CopeO89079 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CopeO89079 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.23■□□□□ 0.35
CopeO89079 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CopeO89079 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
CopeO89079 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
CopeO89079 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.23■□□□□ 0.35
CopeO89079 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.23■□□□□ 0.35
CopeO89079 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CopeO89079 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CopeO89079 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.22■□□□□ 0.35
CopeO89079 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
CopeO89079 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CopeO89079 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CopeO89079 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CopeO89079 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.22■□□□□ 0.35
CopeO89079 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.22■□□□□ 0.35
CopeO89079 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.22■□□□□ 0.35
CopeO89079 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CopeO89079 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CopeO89079 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.21■□□□□ 0.35
CopeO89079 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CopeO89079 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.21■□□□□ 0.35
CopeO89079 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Gm18666-201ENSMUST00000190039 958 ntBASIC17.21■□□□□ 0.35
CopeO89079 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CopeO89079 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms