Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Syn1O88935 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.15■□□□□ 0.34
Syn1O88935 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syn1O88935 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Syn1O88935 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Gm25990-201ENSMUST00000102440 86 ntBASIC17.14■□□□□ 0.33
Syn1O88935 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Syn1O88935 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Gm13418-201ENSMUST00000119097 944 ntBASIC17.14■□□□□ 0.33
Syn1O88935 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Syn1O88935 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.14■□□□□ 0.33
Syn1O88935 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Syn1O88935 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syn1O88935 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
Syn1O88935 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Syn1O88935 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Syn1O88935 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.13■□□□□ 0.33
Syn1O88935 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.13■□□□□ 0.33
Syn1O88935 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Syn1O88935 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syn1O88935 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.13■□□□□ 0.33
Syn1O88935 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
Syn1O88935 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Grk6-206ENSMUST00000224995 2971 ntBASIC17.12■□□□□ 0.33
Syn1O88935 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Syn1O88935 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Syn1O88935 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Syn1O88935 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.12■□□□□ 0.33
Syn1O88935 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syn1O88935 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.11■□□□□ 0.33
Syn1O88935 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Gm25911-201ENSMUST00000157621 56 ntBASIC17.11■□□□□ 0.33
Syn1O88935 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Syn1O88935 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.11■□□□□ 0.33
Syn1O88935 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.11■□□□□ 0.33
Syn1O88935 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.11■□□□□ 0.33
Syn1O88935 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Syn1O88935 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syn1O88935 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Syn1O88935 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.1■□□□□ 0.33
Syn1O88935 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.1■□□□□ 0.33
Syn1O88935 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.1■□□□□ 0.33
Syn1O88935 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Syn1O88935 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.1■□□□□ 0.33
Syn1O88935 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Syn1O88935 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Syn1O88935 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syn1O88935 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms