Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.14■□□□□ 0.65
Becn1O88597 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Becn1O88597 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Becn1O88597 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Becn1O88597 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Becn1O88597 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.13■□□□□ 0.65
Becn1O88597 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.13■□□□□ 0.65
Becn1O88597 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.13■□□□□ 0.65
Becn1O88597 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
Becn1O88597 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Becn1O88597 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Becn1O88597 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Becn1O88597 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.12■□□□□ 0.65
Becn1O88597 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.12■□□□□ 0.65
Becn1O88597 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Becn1O88597 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Becn1O88597 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.12■□□□□ 0.65
Becn1O88597 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Becn1O88597 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Becn1O88597 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Becn1O88597 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Becn1O88597 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Becn1O88597 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Becn1O88597 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.11■□□□□ 0.65
Becn1O88597 Mir8112-201ENSMUST00000184382 131 ntBASIC19.11■□□□□ 0.65
Becn1O88597 Gm5408-201ENSMUST00000197998 747 ntBASIC19.11■□□□□ 0.65
Becn1O88597 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.11■□□□□ 0.65
Becn1O88597 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Becn1O88597 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Becn1O88597 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Becn1O88597 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Becn1O88597 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Becn1O88597 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Becn1O88597 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Becn1O88597 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Becn1O88597 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.09■□□□□ 0.65
Becn1O88597 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms