Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldn1O88551 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldn1O88551 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cldn1O88551 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn1O88551 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Cldn1O88551 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cldn1O88551 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Tgds-204ENSMUST00000228543 1594 ntBASIC14.27□□□□□ -0.12
Cldn1O88551 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn1O88551 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cldn1O88551 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.27□□□□□ -0.13
Cldn1O88551 Gm18195-201ENSMUST00000207604 706 ntBASIC14.27□□□□□ -0.13
Cldn1O88551 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cldn1O88551 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cldn1O88551 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cldn1O88551 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cldn1O88551 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cldn1O88551 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.27□□□□□ -0.13
Cldn1O88551 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cldn1O88551 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cldn1O88551 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn1O88551 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cldn1O88551 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Cldn1O88551 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cldn1O88551 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Cldn1O88551 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn1O88551 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.26□□□□□ -0.13
Cldn1O88551 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.26□□□□□ -0.13
Cldn1O88551 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.26□□□□□ -0.13
Cldn1O88551 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.26□□□□□ -0.13
Cldn1O88551 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn1O88551 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.26□□□□□ -0.13
Cldn1O88551 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cldn1O88551 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.26□□□□□ -0.13
Cldn1O88551 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn1O88551 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.25□□□□□ -0.13
Cldn1O88551 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn1O88551 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn1O88551 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn1O88551 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn1O88551 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn1O88551 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn1O88551 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn1O88551 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn1O88551 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn1O88551 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cldn1O88551 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cldn1O88551 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn1O88551 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn1O88551 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms