Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Mir7071-201ENSMUST00000184847 69 ntBASIC17.25■□□□□ 0.35
Shoc2O88520 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shoc2O88520 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Shoc2O88520 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.24■□□□□ 0.35
Shoc2O88520 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Shoc2O88520 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.24■□□□□ 0.35
Shoc2O88520 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Shoc2O88520 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shoc2O88520 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shoc2O88520 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shoc2O88520 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Shoc2O88520 Gm7889-201ENSMUST00000185591 958 ntBASIC17.23■□□□□ 0.35
Shoc2O88520 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.23■□□□□ 0.35
Shoc2O88520 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shoc2O88520 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.23■□□□□ 0.35
Shoc2O88520 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
Shoc2O88520 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.22■□□□□ 0.35
Shoc2O88520 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.22■□□□□ 0.35
Shoc2O88520 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shoc2O88520 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Shoc2O88520 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shoc2O88520 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shoc2O88520 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Shoc2O88520 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Shoc2O88520 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Shoc2O88520 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Shoc2O88520 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.21■□□□□ 0.35
Shoc2O88520 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Shoc2O88520 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shoc2O88520 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shoc2O88520 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.2■□□□□ 0.34
Shoc2O88520 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Shoc2O88520 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shoc2O88520 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Shoc2O88520 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms