Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Gm5866-201ENSMUST00000177881 973 ntBASIC16.2■□□□□ 0.18
Cacna1hO88427 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.2■□□□□ 0.18
Cacna1hO88427 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.2■□□□□ 0.18
Cacna1hO88427 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.2■□□□□ 0.18
Cacna1hO88427 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Cacna1hO88427 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1hO88427 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Cacna1hO88427 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cacna1hO88427 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.19■□□□□ 0.18
Cacna1hO88427 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.19■□□□□ 0.18
Cacna1hO88427 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.19■□□□□ 0.18
Cacna1hO88427 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.19■□□□□ 0.18
Cacna1hO88427 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cacna1hO88427 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1hO88427 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.18■□□□□ 0.18
Cacna1hO88427 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Cacna1hO88427 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.18■□□□□ 0.18
Cacna1hO88427 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.18■□□□□ 0.18
Cacna1hO88427 Gm4459-201ENSMUST00000118750 468 ntBASIC16.18■□□□□ 0.18
Cacna1hO88427 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.18■□□□□ 0.18
Cacna1hO88427 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.18■□□□□ 0.18
Cacna1hO88427 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.18■□□□□ 0.18
Cacna1hO88427 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cacna1hO88427 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.18■□□□□ 0.18
Cacna1hO88427 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.18■□□□□ 0.18
Cacna1hO88427 Mir8112-201ENSMUST00000184382 131 ntBASIC16.18■□□□□ 0.18
Cacna1hO88427 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.18■□□□□ 0.18
Cacna1hO88427 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cacna1hO88427 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cacna1hO88427 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cacna1hO88427 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.17■□□□□ 0.18
Cacna1hO88427 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cacna1hO88427 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm15653-201ENSMUST00000119247 907 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1hO88427 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm27437-201ENSMUST00000183429 107 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.16■□□□□ 0.18
Cacna1hO88427 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm9172-201ENSMUST00000212092 954 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm8655-201ENSMUST00000221159 852 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cacna1hO88427 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cacna1hO88427 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.16■□□□□ 0.18
Cacna1hO88427 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms