Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.82■□□□□ 0.12
Tgfbr3O88393 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.82■□□□□ 0.12
Tgfbr3O88393 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tgfbr3O88393 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Mir5131-201ENSMUST00000175426 93 ntBASIC15.81■□□□□ 0.12
Tgfbr3O88393 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tgfbr3O88393 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.8■□□□□ 0.12
Tgfbr3O88393 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Gm25925-201ENSMUST00000158314 306 ntBASIC15.8■□□□□ 0.12
Tgfbr3O88393 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.8■□□□□ 0.12
Tgfbr3O88393 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.8■□□□□ 0.12
Tgfbr3O88393 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tgfbr3O88393 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.79■□□□□ 0.12
Tgfbr3O88393 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.79■□□□□ 0.12
Tgfbr3O88393 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tgfbr3O88393 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tgfbr3O88393 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.78■□□□□ 0.12
Tgfbr3O88393 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms