Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vamp8O70404 Asic1-205ENSMUST00000228185 1818 ntBASIC11.8□□□□□ -0.52
Vamp8O70404 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vamp8O70404 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vamp8O70404 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vamp8O70404 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vamp8O70404 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.8□□□□□ -0.52
Vamp8O70404 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vamp8O70404 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Vamp8O70404 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vamp8O70404 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vamp8O70404 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Vamp8O70404 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Vamp8O70404 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Vamp8O70404 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.79□□□□□ -0.52
Vamp8O70404 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.79□□□□□ -0.52
Vamp8O70404 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.79□□□□□ -0.52
Vamp8O70404 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Vamp8O70404 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.79□□□□□ -0.52
Vamp8O70404 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vamp8O70404 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vamp8O70404 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vamp8O70404 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vamp8O70404 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vamp8O70404 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vamp8O70404 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.78□□□□□ -0.52
Vamp8O70404 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Vamp8O70404 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vamp8O70404 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.78□□□□□ -0.52
Vamp8O70404 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Vamp8O70404 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp8O70404 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vamp8O70404 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp8O70404 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
Vamp8O70404 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp8O70404 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp8O70404 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.77□□□□□ -0.53
Vamp8O70404 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp8O70404 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Vamp8O70404 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vamp8O70404 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms