Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Mmp8O70138 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Mmp8O70138 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Mmp8O70138 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.34■□□□□ 0.85
Mmp8O70138 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp8O70138 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Mmp8O70138 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp8O70138 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp8O70138 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.33■□□□□ 0.85
Mmp8O70138 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp8O70138 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Mmp8O70138 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
Mmp8O70138 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp8O70138 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp8O70138 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp8O70138 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Mmp8O70138 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mmp8O70138 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mmp8O70138 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mmp8O70138 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Mmp8O70138 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.33■□□□□ 0.84
Mmp8O70138 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
Mmp8O70138 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Mmp8O70138 AA414768-201ENSMUST00000121924 1257 ntBASIC20.32■□□□□ 0.84
Mmp8O70138 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.32■□□□□ 0.84
Mmp8O70138 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Gm7977-201ENSMUST00000193787 748 ntBASIC20.32■□□□□ 0.84
Mmp8O70138 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.32■□□□□ 0.84
Mmp8O70138 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Mmp8O70138 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Mmp8O70138 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Mmp8O70138 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.32■□□□□ 0.84
Mmp8O70138 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp8O70138 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.31■□□□□ 0.84
Mmp8O70138 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Mmp8O70138 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Mmp8O70138 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.31■□□□□ 0.84
Mmp8O70138 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp8O70138 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.3■□□□□ 0.84
Mmp8O70138 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Mmp8O70138 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Mmp8O70138 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.3■□□□□ 0.84
Mmp8O70138 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp8O70138 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp8O70138 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms