Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pde6dO55057 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Pde6dO55057 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.22□□□□□ -0.29
Pde6dO55057 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.22□□□□□ -0.29
Pde6dO55057 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pde6dO55057 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pde6dO55057 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.22□□□□□ -0.29
Pde6dO55057 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.22□□□□□ -0.29
Pde6dO55057 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6dO55057 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
Pde6dO55057 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pde6dO55057 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.21□□□□□ -0.29
Pde6dO55057 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Pde6dO55057 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.21□□□□□ -0.29
Pde6dO55057 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Pde6dO55057 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.21□□□□□ -0.29
Pde6dO55057 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6dO55057 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Pde6dO55057 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.21□□□□□ -0.29
Pde6dO55057 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Pde6dO55057 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Pde6dO55057 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Reep4-203ENSMUST00000226563 1444 ntBASIC13.21□□□□□ -0.3
Pde6dO55057 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pde6dO55057 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6dO55057 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pde6dO55057 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pde6dO55057 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6dO55057 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pde6dO55057 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6dO55057 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6dO55057 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6dO55057 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.19□□□□□ -0.3
Pde6dO55057 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms