Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ChkaO54804 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ChkaO54804 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ChkaO54804 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.85■□□□□ 0.29
ChkaO54804 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ChkaO54804 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ChkaO54804 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ChkaO54804 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ChkaO54804 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.84■□□□□ 0.29
ChkaO54804 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.84■□□□□ 0.29
ChkaO54804 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ChkaO54804 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.83■□□□□ 0.28
ChkaO54804 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.83■□□□□ 0.28
ChkaO54804 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ChkaO54804 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.83■□□□□ 0.28
ChkaO54804 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ChkaO54804 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ChkaO54804 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ChkaO54804 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ChkaO54804 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.82■□□□□ 0.28
ChkaO54804 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.82■□□□□ 0.28
ChkaO54804 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.82■□□□□ 0.28
ChkaO54804 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.82■□□□□ 0.28
ChkaO54804 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ChkaO54804 Odf3b-204ENSMUST00000227834 930 ntBASIC16.82■□□□□ 0.28
ChkaO54804 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ChkaO54804 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.82■□□□□ 0.28
ChkaO54804 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
ChkaO54804 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ChkaO54804 Dancr-204ENSMUST00000132389 2347 ntBASIC16.81■□□□□ 0.28
ChkaO54804 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
ChkaO54804 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ChkaO54804 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.81■□□□□ 0.28
ChkaO54804 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
ChkaO54804 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ChkaO54804 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.81■□□□□ 0.28
ChkaO54804 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ChkaO54804 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.8■□□□□ 0.28
ChkaO54804 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms