Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.91■□□□□ 0.3
Limk2O54785 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.91■□□□□ 0.3
Limk2O54785 Gm13216-201ENSMUST00000117145 591 ntBASIC16.91■□□□□ 0.3
Limk2O54785 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.91■□□□□ 0.3
Limk2O54785 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Limk2O54785 Gm10566-201ENSMUST00000086739 996 ntBASIC16.91■□□□□ 0.3
Limk2O54785 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Limk2O54785 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Limk2O54785 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Limk2O54785 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Limk2O54785 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.9■□□□□ 0.3
Limk2O54785 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Limk2O54785 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Limk2O54785 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.9■□□□□ 0.3
Limk2O54785 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Gm29518-201ENSMUST00000190858 372 ntBASIC16.9■□□□□ 0.3
Limk2O54785 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.9■□□□□ 0.3
Limk2O54785 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.9■□□□□ 0.3
Limk2O54785 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.9■□□□□ 0.3
Limk2O54785 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Limk2O54785 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Limk2O54785 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Limk2O54785 Phf7-203ENSMUST00000226565 1971 ntBASIC16.89■□□□□ 0.3
Limk2O54785 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Limk2O54785 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Limk2O54785 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Limk2O54785 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.89■□□□□ 0.29
Limk2O54785 Gm17807-201ENSMUST00000186869 298 ntBASIC16.89■□□□□ 0.29
Limk2O54785 Gm18115-201ENSMUST00000221209 621 ntBASIC16.89■□□□□ 0.29
Limk2O54785 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Limk2O54785 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Limk2O54785 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.89■□□□□ 0.29
Limk2O54785 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.89■□□□□ 0.29
Limk2O54785 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Limk2O54785 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.88■□□□□ 0.29
Limk2O54785 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.88■□□□□ 0.29
Limk2O54785 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.88■□□□□ 0.29
Limk2O54785 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Limk2O54785 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Limk2O54785 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limk2O54785 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.87■□□□□ 0.29
Limk2O54785 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limk2O54785 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limk2O54785 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.87■□□□□ 0.29
Limk2O54785 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Limk2O54785 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.87■□□□□ 0.29
Limk2O54785 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Limk2O54785 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
Limk2O54785 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms