Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hdac1O09106 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Hdac1O09106 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac1O09106 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hdac1O09106 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.85■□□□□ 0.77
Hdac1O09106 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.85■□□□□ 0.77
Hdac1O09106 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.85■□□□□ 0.77
Hdac1O09106 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hdac1O09106 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.85■□□□□ 0.77
Hdac1O09106 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac1O09106 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hdac1O09106 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hdac1O09106 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.84■□□□□ 0.77
Hdac1O09106 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Hdac1O09106 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.84■□□□□ 0.77
Hdac1O09106 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Hdac1O09106 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac1O09106 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
Hdac1O09106 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.83■□□□□ 0.77
Hdac1O09106 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hdac1O09106 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac1O09106 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Hdac1O09106 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
Hdac1O09106 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac1O09106 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac1O09106 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac1O09106 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hdac1O09106 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hdac1O09106 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Gm18958-201ENSMUST00000174258 762 ntBASIC19.82■□□□□ 0.76
Hdac1O09106 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.82■□□□□ 0.76
Hdac1O09106 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac1O09106 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hdac1O09106 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.82■□□□□ 0.76
Hdac1O09106 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac1O09106 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac1O09106 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hdac1O09106 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.81■□□□□ 0.76
Hdac1O09106 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hdac1O09106 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hdac1O09106 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Hdac1O09106 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hdac1O09106 Gm7791-201ENSMUST00000219066 539 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms