Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf11bO08712 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf11bO08712 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Tnfrsf11bO08712 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf11bO08712 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf11bO08712 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf11bO08712 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11bO08712 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11bO08712 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Gm21814-202ENSMUST00000203277 873 ntBASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11bO08712 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11bO08712 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11bO08712 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms