Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Gm44430-201ENSMUST00000203376 995 ntBASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Trim34bJ3QNR8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Gm28659-201ENSMUST00000188013 759 ntBASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34bJ3QNR8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Mzt1-203ENSMUST00000227948 952 ntBASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim34bJ3QNR8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim34bJ3QNR8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim34bJ3QNR8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim34bJ3QNR8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms