Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11236J3QMS7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.4■□□□□ 0.38
Gm11236J3QMS7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11236J3QMS7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11236J3QMS7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11236J3QMS7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11236J3QMS7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm11236J3QMS7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 AW822252-206ENSMUST00000208904 237 ntBASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11236J3QMS7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44357-201ENSMUST00000195897 142 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm19658-201ENSMUST00000196231 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44367-201ENSMUST00000196836 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44350-201ENSMUST00000197197 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44390-201ENSMUST00000197533 144 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44313-201ENSMUST00000198018 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44486-201ENSMUST00000198508 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44314-201ENSMUST00000199263 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44394-201ENSMUST00000199558 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44484-201ENSMUST00000199873 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44466-201ENSMUST00000200264 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Gm44359-201ENSMUST00000200671 138 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm11236J3QMS7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm11236J3QMS7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Gm2651-201ENSMUST00000203560 838 ntBASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm11236J3QMS7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm11236J3QMS7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm11236J3QMS7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms