Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-3J3QMG8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-3J3QMG8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
Trav13d-3J3QMG8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav13d-3J3QMG8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Gm6433-201ENSMUST00000118634 875 ntBASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-3J3QMG8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-3J3QMG8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms