Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.04■□□□□ -0
Pcdh1F7BJK1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh1F7BJK1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh1F7BJK1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh1F7BJK1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdh1F7BJK1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Gm12382-201ENSMUST00000122005 922 ntBASIC15.02■□□□□ -0
Pcdh1F7BJK1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh1F7BJK1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh1F7BJK1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh1F7BJK1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh1F7BJK1 Gm27000-201ENSMUST00000182943 842 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms