Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TprF6ZDS4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.27■□□□□ 0.04
TprF6ZDS4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TprF6ZDS4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.27■□□□□ 0.04
TprF6ZDS4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TprF6ZDS4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.27■□□□□ 0.04
TprF6ZDS4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TprF6ZDS4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TprF6ZDS4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Gm26308-201ENSMUST00000157768 69 ntBASIC15.27■□□□□ 0.03
TprF6ZDS4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.27■□□□□ 0.03
TprF6ZDS4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.27■□□□□ 0.03
TprF6ZDS4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TprF6ZDS4 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.27■□□□□ 0.03
TprF6ZDS4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TprF6ZDS4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TprF6ZDS4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TprF6ZDS4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TprF6ZDS4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.26■□□□□ 0.03
TprF6ZDS4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Gm13186-201ENSMUST00000118031 316 ntBASIC15.26■□□□□ 0.03
TprF6ZDS4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.26■□□□□ 0.03
TprF6ZDS4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.26■□□□□ 0.03
TprF6ZDS4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TprF6ZDS4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TprF6ZDS4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.25■□□□□ 0.03
TprF6ZDS4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gm14494-201ENSMUST00000118786 435 ntBASIC15.25■□□□□ 0.03
TprF6ZDS4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.25■□□□□ 0.03
TprF6ZDS4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TprF6ZDS4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TprF6ZDS4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TprF6ZDS4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.24■□□□□ 0.03
TprF6ZDS4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TprF6ZDS4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms