Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm10542F6XDR3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm10542F6XDR3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm10542F6XDR3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Gm10542F6XDR3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Gm10542F6XDR3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Gm10542F6XDR3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Mir6349-201ENSMUST00000184059 97 ntBASIC11.64□□□□□ -0.55
Gm10542F6XDR3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.64□□□□□ -0.55
Gm10542F6XDR3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm10542F6XDR3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Mir5133-201ENSMUST00000174955 77 ntBASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Gm10138-203ENSMUST00000206952 366 ntBASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm10542F6XDR3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Gm15375-201ENSMUST00000119510 849 ntBASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm10542F6XDR3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms