Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Gm44450-201ENSMUST00000199528 114 ntBASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4lE9Q2N0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Gm11336-201ENSMUST00000118168 334 ntBASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cpsf4lE9Q2N0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Gm10013-201ENSMUST00000106074 672 ntBASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4lE9Q2N0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf4lE9Q2N0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms