Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gm13186-201ENSMUST00000118031 316 ntBASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC9.35□□□□□ -0.91
Herc1E9PZP8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Gm15321-201ENSMUST00000121290 288 ntBASIC9.34□□□□□ -0.91
Herc1E9PZP8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Mir8102-201ENSMUST00000184148 139 ntBASIC9.34□□□□□ -0.91
Herc1E9PZP8 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.34□□□□□ -0.91
Herc1E9PZP8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc1E9PZP8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Herc1E9PZP8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm4459-201ENSMUST00000118750 468 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm9885-202ENSMUST00000186234 2209 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Syt7-204ENSMUST00000223586 1344 ntBASIC9.33□□□□□ -0.92
Herc1E9PZP8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc1E9PZP8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gm12504-201ENSMUST00000120860 2231 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc1E9PZP8 Gm7901-201ENSMUST00000120430 1597 ntBASIC9.32□□□□□ -0.92
Herc1E9PZP8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms