Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm28043E0CXC2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28043E0CXC2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Gm10812-201ENSMUST00000099864 546 ntBASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28043E0CXC2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28043E0CXC2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28043E0CXC2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms