Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
IsxA1A546 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.56■□□□□ 0.08
IsxA1A546 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
IsxA1A546 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.55■□□□□ 0.08
IsxA1A546 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IsxA1A546 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.55■□□□□ 0.08
IsxA1A546 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.55■□□□□ 0.08
IsxA1A546 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.55■□□□□ 0.08
IsxA1A546 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IsxA1A546 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IsxA1A546 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.54■□□□□ 0.08
IsxA1A546 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
IsxA1A546 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
IsxA1A546 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
IsxA1A546 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.54■□□□□ 0.08
IsxA1A546 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IsxA1A546 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.53■□□□□ 0.08
IsxA1A546 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
IsxA1A546 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.53■□□□□ 0.08
IsxA1A546 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.53■□□□□ 0.08
IsxA1A546 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.53■□□□□ 0.08
IsxA1A546 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
IsxA1A546 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IsxA1A546 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IsxA1A546 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Gm13401-201ENSMUST00000117074 291 ntBASIC15.52■□□□□ 0.08
IsxA1A546 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.52■□□□□ 0.08
IsxA1A546 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.52■□□□□ 0.08
IsxA1A546 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IsxA1A546 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.52■□□□□ 0.08
IsxA1A546 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.52■□□□□ 0.07
IsxA1A546 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
IsxA1A546 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.52■□□□□ 0.07
IsxA1A546 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IsxA1A546 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms