Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-1A0N8R0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-1A0N8R0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Gm27000-201ENSMUST00000182943 842 ntBASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Gm18666-201ENSMUST00000190039 958 ntBASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-1A0N8R0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Gm37179-201ENSMUST00000194862 823 ntBASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-1A0N8R0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trav12d-1A0N8R0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms