Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Gm5580A0A0N4SVP8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm7638-201ENSMUST00000121348 967 ntBASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5580A0A0N4SVP8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5580A0A0N4SVP8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5580A0A0N4SVP8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm5580A0A0N4SVP8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms