Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9d-4A0A0G2JG37 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9d-4A0A0G2JG37 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gm38285-201ENSMUST00000192928 922 ntBASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gm42642-201ENSMUST00000200683 355 ntBASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9d-4A0A0G2JG37 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav9d-4A0A0G2JG37 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms