Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm23634-201ENSMUST00000175071 91 ntBASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mir8112-201ENSMUST00000184382 131 ntBASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Il3ra-202ENSMUST00000223589 738 ntBASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 AA414768-201ENSMUST00000121924 1257 ntBASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm17661-201ENSMUST00000170317 270 ntBASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13n-1A0A0G2JEU8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms