Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Gm18959-201ENSMUST00000208954 655 ntBASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv13-1A0A0B4J1P8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms