Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav11A0A0B4J1J9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav11A0A0B4J1J9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Mir6349-201ENSMUST00000184059 97 ntBASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav11A0A0B4J1J9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Gm6576-201ENSMUST00000169678 883 ntBASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav11A0A0B4J1J9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms