Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv16A0A0B4J1H3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv16A0A0B4J1H3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv16A0A0B4J1H3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv16A0A0B4J1H3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Il3ra-202ENSMUST00000223589 738 ntBASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trbv16A0A0B4J1H3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms