Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.06
Ighv1-43A0A0A6YXN5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.39■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm7153-201ENSMUST00000117092 455 ntBASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm10052-201ENSMUST00000168019 960 ntBASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm7729-201ENSMUST00000050143 801 ntBASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ighv1-43A0A0A6YXN5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms