Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Gm4974-201ENSMUST00000209974 875 ntBASIC13.28□□□□□ -0.28
Trav17A0A075B655 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.28□□□□□ -0.28
Trav17A0A075B655 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav17A0A075B655 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trav17A0A075B655 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav17A0A075B655 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.27□□□□□ -0.29
Trav17A0A075B655 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.27□□□□□ -0.29
Trav17A0A075B655 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav17A0A075B655 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.26□□□□□ -0.29
Trav17A0A075B655 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav17A0A075B655 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav17A0A075B655 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms