Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-2A0A075B649 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm7290-201ENSMUST00000104990 617 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm12918-201ENSMUST00000120234 636 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm15710-201ENSMUST00000121821 636 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm5075-201ENSMUST00000196916 622 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-2A0A075B649 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Gm11927-201ENSMUST00000118472 759 ntBASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-2A0A075B649 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms