Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14n-3A0A075B645 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Gm27454-201ENSMUST00000185090 204 ntBASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14n-3A0A075B645 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav14n-3A0A075B645 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav14n-3A0A075B645 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav14n-3A0A075B645 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Gm2399-201ENSMUST00000104944 225 ntBASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Gm42778-201ENSMUST00000199644 553 ntBASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14n-3A0A075B645 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav14n-3A0A075B645 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.62□□□□□ -0.39
Trav14n-3A0A075B645 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav14n-3A0A075B645 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav14n-3A0A075B645 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms