Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 IGHV5-78-201ENST00000450948 295 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 GAPDHP56-201ENST00000506031 988 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 AF230666.2-201ENST00000602328 725 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 MTCO2P22-201ENST00000603246 681 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 AL391834.2-201ENST00000609982 546 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 MIR378J-201ENST00000611988 109 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 AL022393.1-201ENST00000625142 1677 ntBASIC5.63□□□□□ -1.51
HDAC6Q9UBN7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 SPATA2P1-201ENST00000431223 2055 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 SDAD1P1-202ENST00000524156 2051 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC063976.2-201ENST00000425667 3556 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RNA5SP191-201ENST00000362585 102 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RNU6-792P-201ENST00000363490 107 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RN7SKP113-201ENST00000363891 295 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RNA5SP105-201ENST00000391123 113 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AF186996.5-201ENST00000418098 904 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC092570.3-201ENST00000420113 693 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AL354714.3-201ENST00000447284 493 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 TCEA1P1-201ENST00000449716 880 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 FCF1P6-201ENST00000456841 595 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC092905.1-201ENST00000467527 949 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RN7SL346P-201ENST00000491561 294 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC093014.1-201ENST00000548926 724 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC018552.1-201ENST00000562099 811 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC133794.1-201ENST00000602731 914 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC105105.5-201ENST00000622635 1294 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AC090772.4-201ENST00000623599 362 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 MFSD8-216ENST00000641147 4009 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC6Q9UBN7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 RNA5SP505-201ENST00000364748 108 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AC006210.2-201ENST00000367074 1545 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AC104333.2-201ENST00000422630 192 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 MTND5P23-201ENST00000430812 1655 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AL512637.2-201ENST00000431287 1256 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 RPL23AP23-201ENST00000452590 471 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 NPM1P29-201ENST00000483112 803 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AC021146.7-201ENST00000509604 775 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 SCARNA1-201ENST00000517138 166 ntBASIC5.61□□□□□ -1.51
HDAC6Q9UBN7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms