Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RN7SKP267-201ENST00000410381 285 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 MAPRE1P3-201ENST00000435438 796 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC010733.1-201ENST00000451515 401 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 VN1R32P-201ENST00000452234 905 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 SEPT7P6-201ENST00000469999 1143 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC106872.4-201ENST00000510050 523 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AP002360.3-201ENST00000607673 710 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 AC009163.6-201ENST00000612367 342 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 MIR4302-201ENST00000638058 60 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPF2Q9HAU5 MAPK10-304ENST00000641341 3984 ntBASIC5.57□□□□□ -1.52
UPF2Q9HAU5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 NAMPTP1-201ENST00000440465 2514 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 Z98755.1-201ENST00000407015 1384 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 OR51B3P-201ENST00000412287 913 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC112498.1-201ENST00000444401 332 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 UBA52P7-201ENST00000486088 380 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 HIGD1AP14-201ENST00000507617 282 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC006499.6-201ENST00000511169 607 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 RNA5SP154-201ENST00000516193 111 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 RN7SKP147-201ENST00000517154 244 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC005229.3-201ENST00000603438 323 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC011453.2-201ENST00000603737 729 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 LINC01739-205ENST00000641890 573 ntBASIC5.56□□□□□ -1.52
UPF2Q9HAU5 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF2Q9HAU5 SAMMSON-226ENST00000642089 1582 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 RPL23P2-201ENST00000320371 421 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 MIR448-201ENST00000362131 111 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 SNORA40.4-201ENST00000390971 128 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 RN7SKP167-201ENST00000411047 285 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AC069285.2-201ENST00000440210 275 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 GEMIN8P3-201ENST00000445417 720 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 MYO5BP2-201ENST00000449815 1277 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 GAPDHP56-201ENST00000506031 988 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 RPL7L1P4-201ENST00000513004 707 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 MORF4L1P3-201ENST00000525966 950 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AC006116.3-201ENST00000592968 361 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 AP000864.1-201ENST00000609424 650 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 PABPC1P6-201ENST00000445594 1829 ntBASIC5.55□□□□□ -1.52
UPF2Q9HAU5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF2Q9HAU5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UPF2Q9HAU5 RNU1-15P-201ENST00000353977 144 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 AL391361.1-201ENST00000405580 489 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.54□□□□□ -1.52
UPF2Q9HAU5 CHEK2P3-201ENST00000416118 248 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms