Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 SNRPEP3-201ENST00000338402 276 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 RNA5SP188-201ENST00000362916 129 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 U8.3-201ENST00000363321 132 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 SNRPEP2-201ENST00000397592 279 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 PDCL3P5-201ENST00000398028 722 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 HMGB3P20-201ENST00000417997 600 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL161742.1-201ENST00000418154 584 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL359633.1-201ENST00000421403 310 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 RN7SL654P-201ENST00000479178 292 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 RN7SL518P-201ENST00000491887 280 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC083906.1-201ENST00000509298 406 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 RNA5SP318-201ENST00000516352 92 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 RN7SKP283-201ENST00000517197 270 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL157899.1-201ENST00000604110 936 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL035413.2-201ENST00000604801 525 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC011891.2-201ENST00000604949 397 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL078624.2-201ENST00000605063 554 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL683826.1-201ENST00000624104 627 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC091905.1-201ENST00000624400 311 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC140479.4-205ENST00000636339 820 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL596275.2-208ENST00000641192 594 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AL121936.2-201ENST00000641935 662 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 AC007406.5-201ENST00000570140 3170 ntBASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
BHLHE41Q9C0J9 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AC090220.1-201ENST00000593078 1699 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AC008957.3-201ENST00000624112 2242 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 Y_RNA.86-201ENST00000363020 111 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 RNU6-878P-201ENST00000384578 110 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 RNA5SP474-201ENST00000391234 90 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AL049693.1-201ENST00000402760 611 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AL603766.1-201ENST00000407763 664 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 SOD1P1-201ENST00000407803 440 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 RPS6P23-201ENST00000413224 722 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AL662791.3-201ENST00000413771 776 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 JKAMPP1-201ENST00000413804 919 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 RBMY2KP-201ENST00000418221 992 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 RPS27AP6-201ENST00000427962 448 ntBASIC6.36□□□□□ -1.39
BHLHE41Q9C0J9 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms