Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC42Q96M95 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC42Q96M95 AC073091.2-201ENST00000603205 907 ntBASIC4.81□□□□□ -1.64
CCDC42Q96M95 Z98200.1-201ENST00000607298 470 ntBASIC4.81□□□□□ -1.64
CCDC42Q96M95 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.81□□□□□ -1.64
CCDC42Q96M95 AC009237.17-201ENST00000618111 748 ntBASIC4.81□□□□□ -1.64
CCDC42Q96M95 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.81□□□□□ -1.64
CCDC42Q96M95 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC42Q96M95 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC42Q96M95 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC42Q96M95 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC42Q96M95 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 SNORA74C-2-201ENST00000411179 201 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 RPL23AP27-201ENST00000415161 451 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC006967.1-201ENST00000467608 589 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC006499.6-201ENST00000511169 607 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC110775.1-201ENST00000513721 462 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 RNA5SP497-201ENST00000516081 97 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 IGLV2-28-201ENST00000520681 304 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 CYP4A43P-201ENST00000568156 121 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 RPL23AP97-201ENST00000568955 471 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 MTCO1P11-201ENST00000429111 1528 ntBASIC4.8□□□□□ -1.64
CCDC42Q96M95 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC42Q96M95 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC42Q96M95 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 Z98755.1-201ENST00000407015 1384 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 MTND4P26-201ENST00000415971 1359 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC018529.3-201ENST00000624212 2254 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC42Q96M95 RN7SKP149-201ENST00000363008 344 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 SNORA51.8-201ENST00000384234 132 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AL356968.2-201ENST00000412769 1257 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC073136.2-201ENST00000417282 849 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC42Q96M95 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 HLA-N-201ENST00000437516 135 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 RPL23AP93-201ENST00000440847 484 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 RPL7P33-201ENST00000444159 742 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 PPIAP20-201ENST00000449839 135 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 RPL7AP6-201ENST00000477943 801 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AL133338.2-201ENST00000604292 736 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC067931.1-201ENST00000624190 671 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 LINC01808-202ENST00000641680 1116 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC42Q96M95 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC42Q96M95 MAPK10-304ENST00000641341 3984 ntBASIC4.79□□□□□ -1.64
CCDC42Q96M95 AC105074.1-201ENST00000623380 3095 ntBASIC4.78□□□□□ -1.64
CCDC42Q96M95 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC42Q96M95 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC42Q96M95 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC42Q96M95 KPNA2P2-201ENST00000419546 1489 ntBASIC4.78□□□□□ -1.64
CCDC42Q96M95 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC42Q96M95 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC42Q96M95 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms