Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HMGB4Q8WW32 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 ENSAP3-201ENST00000312710 333 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 SNORA62.2-201ENST00000364672 152 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 RNU6-98P-201ENST00000384173 107 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 MCTS2P-201ENST00000394552 546 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 CYB5AP4-201ENST00000396692 399 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC246680.2-201ENST00000422106 389 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 MTND2P2-201ENST00000434633 945 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 RPL7P29-201ENST00000437151 728 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC092170.1-201ENST00000440211 356 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 OR10R1P-201ENST00000441524 1141 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 EIF2S2P2-201ENST00000447161 982 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 RPL31P44-201ENST00000447680 377 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 RPS29P22-201ENST00000472363 168 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC020898.1-201ENST00000474167 787 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC113420.1-201ENST00000507903 571 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC083923.1-201ENST00000523708 376 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 OR10V3P-201ENST00000525712 725 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 OR8K4P-201ENST00000534608 872 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC006518.2-201ENST00000542513 940 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC095057.3-201ENST00000567102 1157 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC027455.1-201ENST00000574104 594 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 MIR4675-201ENST00000577898 77 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC022884.3-201ENST00000579571 248 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC011487.3-201ENST00000593607 453 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC024060.1-201ENST00000607052 494 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC004076.2-201ENST00000620532 3323 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AL606537.1-201ENST00000607258 2011 ntBASIC5.3□□□□□ -1.56
HMGB4Q8WW32 AC005005.4-201ENST00000623789 16698 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 RNU1-146P-201ENST00000364015 165 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 RNU6-225P-201ENST00000384613 103 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AL807761.1-201ENST00000417622 171 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AL449283.1-202ENST00000418249 604 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ELOCP11-201ENST00000436690 332 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 CEACAMP9-201ENST00000442990 513 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 ELOCP16-201ENST00000444494 332 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGB4Q8WW32 PSAT1P4-201ENST00000466500 526 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC092324.1-201ENST00000468671 324 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC097484.1-201ENST00000471148 389 ntBASIC5.29□□□□□ -1.56
HMGB4Q8WW32 AC006463.2-201ENST00000473326 348 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms